[BioC] Problem when running check

Martin Morgan mtmorgan at fhcrc.org
Thu Apr 17 20:40:51 CEST 2008


Hi Kenneth --

This is perhaps a small issue in R, and a solution is actively under 
investigation

Probably the warning is spurious, but the thing that is triggering it is 
when a generic is defined in several different packages that your 
package imports. For instance, flowViz imports flowCore and Biobase, 
both of which have a generic 'description'. One possible solution is to 
replace

import(SomePkg)

with

import(SomePkg, someFunc)

i.e., to more selectively include required functions.

Martin

Kenneth Lo wrote:
> When I run R CMD check on a package, I've got the following warning  
> message repetitively at various checking stages:
> 
> Warning in getPackageName(where) :
>    Created a package name, "2008-04-15 04:57:30", when none found
> 
> I have this problem when running check on R2.7 but not on R2.6.  Does  
> anyone have any idea about its cause?
> 
> Thanks!
> 
> Kenneth
> 
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-- 
Martin Morgan
Computational Biology / Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N.
PO Box 19024 Seattle, WA 98109

Location: Arnold Building M2 B169
Phone: (206) 667-2793



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