[BioC] similarity between two gene lists with varied length

[Deanne Taylor]

The made4 package in bioconductor can report gene list similarities. 



---
Deanne Taylor PhD
Executive Director, Bioinformatics Core
Department of Biostatistics
Harvard School of Public Health
655 Huntington Avenue
Boston, MA 02115
dtaylor at hsph.harvard.edu






>>> "Weiwei Shi" <helprhelp at gmail.com> 08/23/08 8:59 PM >>>
Dear listers,

a little off-topic:

I am looking for and compare algorithms which can calculate "distance" or
"similarity" between two gene lists with different lengths.

Any paper, any implementation in R and any suggestion is welcome!

Thanks,

-- 
Weiwei Shi, Ph.D
Research Scientist
GeneGO, Inc.

"Did you always know?"
"No, I did not. But I believed..."
---Matrix III

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