[BioC] Retrieving sequences from NCBI
sdavis2 at mail.nih.gov
Wed Jul 9 23:15:24 CEST 2008
On Wed, Jul 9, 2008 at 4:16 PM, J. Miguel Marin
<jmmarin at est-econ.uc3m.es> wrote:
> Dear users,
> I do not know whether this is a very simple question but I could not solve
> by myself...
> I would like to know if there exists in Bioconductor something like the
> matlab command "getgenbank". It serves to retrieve sequence information from
> the GenBank database in a simple way, and to download just the sequences to
> analyze them.
> I have seen the GEOquery and seqinr libraries but I could not download some
> given mitochondrial sequences.
Eutils can be used for this.
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