[BioC] How to map a Sentrix BeadChip ID to BioC annotation package?

Christian Kohler Christian.Kohler at klinik.uni-regensburg.de
Thu Jul 10 16:29:46 CEST 2008

Dear list,

is there a way to map a given Sentrix BeadChip ID to its corresponding
Bioconductor annotation package?

For example, all samples originating from a human Sentrix-6 V2 BeadChip
have the SentrixMatrixID '1888849019'.
As our group runs a microarray analysis pipeline, it would be convenient
to automatically use the adequate Bioconductor annotation package (e.g.
illuminaHumanv1.db), given the SentrixMatrixID.

Thanks for any help.



Christian Kohler
Institute of Functional Genomics
Computational Diagnostics
University of Regensburg (BioPark I)
D-93147 Regensburg (Germany)

Tel. +49 941 943 5055
Fax  +49 941 943 5020
christian.kohler at klinik.uni-regensburg.de

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