Kasper Daniel Hansen
khansen at stat.Berkeley.EDU
Mon Jul 14 20:00:45 CEST 2008
On Jul 14, 2008, at 7:42 AM, Steve Lianoglou wrote:
> Hi Mark,
> On Jul 13, 2008, at 6:58 PM, Mark Cowley wrote:
>> There's also MblobR.
>> Song, J. S.; Maghsoudi, K.; Li, W.; Fox, E.; Quackenbush, J. & Liu,
>> X. S.
>> Microarray blob-defect removal improves array analysis.
>> Bioinformatics, 2007, 23, 966-971
> I just downloaded this to check it out ... have you been using it
> all? After downloading all the dependency jars, I realized that
> it only opens CEL files saved as version 4 (the binary one), while
> the files I have are version 3.
> Do you (or anybody else) know if there is an easy way to convert
> between versions of CEL files?
>  For anybody else who's trying to run this, you'll need to have
> in your classpath:
> * junit.jar: http://junit.org/
> * swing-layout.jar: https://swing-layout.dev.java.net/
>  Affy cel version info: http://www.stat.lsa.umich.edu/~kshedden/Courses/Stat545/Notes/AffxFileFormats/cel.html
> Steve Lianoglou
> Graduate Student: Physiology, Biophysics and Systems Biology
> Weill Cornell Medical College
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor
More information about the Bioconductor