[BioC] Vsn and rma with PM only arrays

Wolfgang Huber huber at ebi.ac.uk
Wed May 7 13:07:45 CEST 2008

Roumyana Yordanova wrote:
> I am trying to use rma or vsn on PM arrays (in particular Mouse 430).
> Both stoped with an "error in .local(object,...) : subscript out of 
> bounds".
> (mmindex returns 0 for all probes. Is this the right coding for PM 
> arrays or this is the problem?).
> Thanks for any help.
> Roumyana

Dear Roumyana,

please send a reproducible example (R script, using data that we can 
access as well), the output of sessionInfo() and the exact error message 
you get. Then I or someone might be able to help.

Best wishes

Wolfgang Huber  EBI/EMBL  Cambridge UK  http://www.ebi.ac.uk/huber

More information about the Bioconductor mailing list