[BioC] missing functions in affy package

James W. MacDonald jmacdon at med.umich.edu
Mon Nov 3 21:50:47 CET 2008


Hi Rachael,

The affy package now has a namespace, and I am sure this isn't an
exported function. If you want to use it directly, you can get to it 
using the ':::' operator (e.g., affy:::normalize.quantiles()).

Best,

Jim



Rachael Hageman wrote:
> To Whom it May Concern,
> 
> I use the function "normalize.quantiles" in the preprocessCore/affy
> package on a regular basis for my illumina data.  I have recently
> installed the latest version of R (2.8) and the affy package off of
> Bioconductor.  I noticed that this function no longer exists within
> the package.  I wonder if this is an oversight on my part, or if it
> isn't, is there is a reason it was pulled from the package?  I am on
> a Mac, although my Windows machine has the same problem with the new
> version.
> 
> Thanks in advance, Rachael
> 
> _______________________________________________ Bioconductor mailing
> list Bioconductor at stat.math.ethz.ch 
> https://stat.ethz.ch/mailman/listinfo/bioconductor Search the
> archives:
> http://news.gmane.org/gmane.science.biology.informatics.conductor

-- 
James W. MacDonald, M.S.
Biostatistician
Hildebrandt Lab
8220D MSRB III
1150 W. Medical Center Drive
Ann Arbor MI 48109-0646
734-936-8662



More information about the Bioconductor mailing list