[BioC] Illumina vs Affy chips

[Sean Davis]

On Mon, Jun 8, 2009 at 7:37 PM, Thomas
Hampton<Thomas.H.Hampton at dartmouth.edu> wrote:
> Thanks so much Sean. I'll take that as a moderate "yes" they are kind of
> tricky.

Not really.

source('http://bioconductor.org/biocLite.R')
biocLite(c('lumi','beadarray'))

Will install them and their dependencies.

Sean


> On Jun 8, 2009, at 6:57 PM, Sean Davis wrote:
>
>> On Mon, Jun 8, 2009 at 6:39 PM, Thomas
>> Hampton<Thomas.H.Hampton at dartmouth.edu> wrote:
>>>
>>> I have found dealing with the Affy 1.0 ST chips a bit difficult and have
>>> yet
>>> to get our systems mavens to get
>>> xps functional on our big computer. I was wondering whether Illumina
>>> chips
>>> present similar challenges
>>> and how easy it is to install and use Bioconductor packages in the
>>> Illumina
>>> world. Is this easy or hard?
>>
>> The lumi and beadarray packages are both illumina-centric.
>>
>> Sean
>
>