[BioC] help with factDesign package

Richard Pearson richard.pearson at well.ox.ac.uk
Tue Jun 9 09:41:04 CEST 2009


Alberto, see:
http://bioconductor.org/packages/release/data/experiment/html/estrogen.html

Cheers

Richard


Alberto Goldoni wrote:
> Hi to everybody.
> 
> i would like to know the right procedure to obtain the dataset estrogen
> presented in the package factDesign.
> 
>> estrogen
> ExpressionSet (storageMode: lockedEnvironment)
> assayData: 500 features, 8 samples
>   element names: exprs, se.exprs
> phenoData
>   sampleNames: et1.CEL, et2.CEL, ..., ET2.CEL  (8 total)
>   varLabels and varMetadata description:
>     ES: presence or absence of estrogen
>     TIME: length of exposure to treatment (hours)
> featureData
>   featureNames: 33598_r_at, 39859_r_at, ..., 39453_at  (500 total)
>   fvarLabels and fvarMetadata description: none
> experimentData: use 'experimentData(object)'
> Annotation: hgu95av2
> 
> 
> Best regards.
> 
> 

-- 
Richard D Pearson                          richard.pearson at well.ox.ac.uk
Wellcome Trust Centre for Human Genetics   http://www.well.ox.ac.uk/~rpearson
University of Oxford                       Tel: +44 (0)1865 287575
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