[BioC] exon.pmcdf and mouseexon.pmcdf

Michal Okoniewski michal.okoniewski at fgcz.ethz.ch
Tue May 12 08:50:59 CEST 2009

Hi Chunjiang

Those two are metadata packages used for summarization, redone from Affy CDF files. They should install 
OK on Windows or Mac, however as they include all 1.4M or 1.2M(mouse) probesets, performing the 
summarization would require a lot of RAM. Alternatively go for aroma or xps (it uses proper pgf and bgp files)
to summarize on a less powerful machine. 
Btw, the two packages that you mentioned are not required to run exonmap - if you have your AffyBatch 
or probeset lists from other sources you can use exonmap on those data. 


-----Original Message-----
From: bioconductor-bounces at stat.math.ethz.ch on behalf of chunjiang he
Sent: Mon 5/11/2009 8:04 PM
To: bioconductor at stat.math.ethz.ch
Subject: [BioC] exon.pmcdf and mouseexon.pmcdf
hi all,
i want to know if these two R packages have the windows version. Thanks very


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