[BioC] Annotation Rat Gene 1.0ST

[Benilton Carvalho]

Dear German,

I believe you need the ragene10stprobeset.db package.

b

On Oct 12, 2009, at 4:13 AM, Germán González wrote:

> I used "pd.ragene.1.0.st.v1" to perform a microarray analysis of  
> Affymetrix Rat Gene 1.0ST. Now I need annotation data of the array,  
> then I try this:
>
> probe_ids <- rat$ID
> gene_symbols <- aafSymbol(probe_ids, "pd.ragene.1.0.st.v1.db")
> go_categories <- aafGO(probe_ids, "pd.ragene.1.0.st.v1.db")
> genbank_accessions <- aafGenBank(probe_ids, "pd.ragene.1.0.st.v1.db")
>
> but this does not work because the file .db does not exist. How can  
> I get the annotation data?
>
> Thanks, Germán
>
>        [[alternative HTML version deleted]]
>
> <ATT00001.txt>