[BioC] Gene Ontology analysis for non-affy data
liang at cbio.mskcc.org
Wed Sep 16 23:26:13 CEST 2009
I am new to GO analysis.
What I want to do is pretty simple: I have a list of mouse gene (gene
symbol as ID) from illumina expression experiment and I want to found
out if any GO term is significantly enriched among these genes.
It seems GOstats and topGO are all designed for Affymetrix data.
I guess I could (in theory) use GO.db to query GO,but I am afraid of
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