[BioC] The issue with Report Pearson instead of Spearman
lin6 at niaid.nih.gov
Fri Aug 13 17:47:31 CEST 2010
Thank you for your help. Please forgive me always asking some naive questions as
I have never used the R language before and I have to learn everything from zero.
My question is how I can show the correlation with “pearson” instead of
"spearman" in the HTML reports.
My understanding is when I call
repAgree <- getMeasureRepAgreement(xn, corr.method = "pearson"),
the results are stored in the asssayData slot of the cellHTS2 object.
Then how can I let it show in the reports?
Thank you so much!
R version 2.11.1(2010-05-31)
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