[BioC] The issue with Report Pearson instead of Spearman

Ning lin6 at niaid.nih.gov
Fri Aug 13 17:47:31 CEST 2010

Hi Wolfgang,

Thank you for your help. Please forgive me always asking some naive questions as
I have never used the R language before and I have to learn everything from zero.
My question is how I can show the correlation with “pearson” instead of
"spearman" in the HTML reports. 

My understanding is when I call 

repAgree <- getMeasureRepAgreement(xn, corr.method = "pearson"),

the results are stored in the asssayData slot of the cellHTS2 object.

Then how can I let it show in the reports?

Thank you so much!



R version 2.11.1(2010-05-31)

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