[BioC] Fwd: cannot install SNPlocs.Hsapiens.dbSNP.20090506

Dan Strumpf dstrumpf at uhnresearch.ca
Mon Jan 11 19:45:48 CET 2010


Thanks, Herve! I'll check it and get back to you if need.
Cheers,
Dan

Hervé Pagès wrote:
> Hi Dan,
> 
> Thanks for reporting this.
> 
> At the time I made SNPlocs.Hsapiens.dbSNP.20090506 (back in June 2009),
> I dropped it in BioC release (BioC 2.4 at that time) but I apparently
> forgot to drop it in devel (BioC 2.5). Then, in October, when BioC
> 2.5 became the current release, the package was still missing.
> I've just added the source tarball to BioC 2.5 and BioC 2.6 and it
> should become available via biocLite() in the next hour.
> 
> (Binary versions for Windows and Mac should follow in the next couple of
> days.)
> 
> Please, let me know if you find anything else.
> 
> Cheers,
> H.
> 
> 
> Dan Strumpf wrote:
>> Thanks for your prompt replies Sean and James.
>> I've got the package information from a previous mailing list message 
>> by Herve Pages (the one you've pointed out, Sean), and therefore I 
>> thought it should be available.
>>
>> Dan
>>
>>
>> Sean Davis wrote:
>>> Forgot to cc group on this....
>>>
>>>
>>> ---------- Forwarded message ----------
>>> From: Sean Davis <seandavi at gmail.com>
>>> Date: Mon, Jan 11, 2010 at 11:27 AM
>>> Subject: Re: [BioC] cannot install SNPlocs.Hsapiens.dbSNP.20090506
>>> To: Dan Strumpf <dstrumpf at uhnresearch.ca>
>>> Cc: Herve Pages <hpages at fhcrc.org>, Marc Carlson <mcarlson at fhcrc.org>
>>>
>>>
>>> On Mon, Jan 11, 2010 at 10:23 AM, Dan Strumpf 
>>> <dstrumpf at uhnresearch.ca> wrote:
>>>> Hi,
>>>> received these messagages when trying to install
>>>>
>>>> SNPlocs.Hsapiens.dbSNP.20090506
>>>
>>> I don't see this one in the repository for Bioc 2.5?  However, it
>>> looks from this message that it should be available:
>>>
>>> https://stat.ethz.ch/pipermail/bioconductor/2009-June/027982.html
>>>
>>> I've cc'ed Herve Pages to see if he has any ideas.
>>>
>>> Sean
>>>
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>>
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>



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