[BioC] Illumina chip probe sequences

Mike Smith grimbough at googlemail.com
Wed Jul 28 11:24:07 CEST 2010


Hi Pete,

I'm not sure if there are any packages which provide the probe 
sequences, but the annotation files provided by Mark Dunning are based 
on the files found here :
http://www.compbio.group.cam.ac.uk/Resources/Annotation/index.html

The files have rather a lot of information  in them, but you can dig out 
the probe sequences for most of the human and mouse expression arrays.

I hope that's some help,

Mike Smith

Peter Bazeley wrote:
> Dear List,
>
> Is there a package that stores the probe sequences for Illumina's chips,
> sort of like the hgu133aprobe package?
>
>
> Thank you for any input,
> Pete
>
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