[BioC] limma installation trouble

[Martin Morgan]

On 11/01/2010 03:42 PM, khasanova at berkeley.edu wrote:
> Hi,
> 
> I'm having trouble installing limma. I have R version 2.10. This is the
> error message I keep getting:
> 
>> source("http://bioconductor.org/biocLite.R")
> Warning messages:
> 1: In safeSource() : Redefining ‘biocinstall’
> 2: In safeSource() : Redefining ‘biocinstallPkgGroups’
> 3: In safeSource() : Redefining ‘biocinstallRepos’
>> biocLite('limma')
> Error in v[, i] : incorrect number of dimensions

Hi Anna -- try starting R from the command line with

  R  --vanilla

If that fails include the output of sessionInfo() and traceback(), after
the error occurs.

Martin

>>
> 
> How can I fix this?
> Thank you,
> Anna
> 
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