[BioC] problem installing affyPLMpackage

Vincent Carey stvjc at channing.harvard.edu
Wed Apr 20 22:55:44 CEST 2011


I can confirm that the binary was unavailable now for R 2.12.1, using windows 7.

However, I was able to build and install from source on windows 7,
using the current Rtools for windows.  So that is one possible
workaround until the binary is available again.

Note that current R is 2.13; with that version, biocLite installation
succeeded on windows 7.

On Wed, Apr 20, 2011 at 3:20 PM, Matthew McCormack
<mccormack at molbio.mgh.harvard.edu> wrote:
> I am getting the following error message when I try to install the
> affyPLM package:
>
> Using R version 2.12.1, biocinstall version 2.7.6.
> Installing Bioconductor version 2.7 packages:
> [1] "affyPLM"
> Please wait...
>
> Installing package(s) into 'C:\Users\matthew\Documents/R/win-library/2.12'
> (as 'lib' is unspecified)
> Warning message:
> In getDependencies(pkgs, dependencies, available, lib) :
>   package 'affyPLM' is not available
>
>   I am using 64-bit R (v. 2.12.1) on Windows7.
>
> Matthew McCormack
>
>
>        [[alternative HTML version deleted]]
>
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