[BioC] Can not install Ruuid package in a linux server

[Mao Jianfeng]

Dear listers,

I am facing problem of installing Ruuid package in a linux server.
Please give some helps.

Thanks in advance.

Jian-Feng,


#################(1) install Ruuid package from
binary###########################################
> source("http://bioconductor.org/biocLite.R")
BioC_mirror = http://www.bioconductor.org
Change using chooseBioCmirror().
> biocLite('Ruuid')
Using R version 2.12.0, biocinstall version 2.7.4.
Installing Bioconductor version 2.7 packages:
[1] "Ruuid"
Please wait...

Installing package(s) into ‘/ebio/abt6/jmao/rpacks’
(as ‘lib’ is unspecified)
trying URL 'http://www.bioconductor.org/packages/2.7/bioc/src/contrib/Ruuid_1.28.0.tar.gz'
Content type 'application/x-gzip' length 71906 bytes (70 Kb)
opened URL
==================================================
downloaded 70 Kb

* installing *source* package ‘Ruuid’ ...
checking for pkg-config... /usr/bin/pkg-config
checking for glib-config... no
checking for glib-2.0... configure: error: No glib package information found
ERROR: configuration failed for package ‘Ruuid’
* removing ‘/ebio/abt6/jmao/rpacks/Ruuid’

The downloaded packages are in
	‘/tmp/RtmpGQAHn2/downloaded_packages’
Warning message:
In install.packages(pkgs = pkgs, repos = repos, ...) :
  installation of package 'Ruuid' had non-zero exit status
> library(Ruuid)
Error in library(Ruuid) : there is no package called 'Ruuid'

#####################(2) install Ruuid package from
source#######################################
> biocLite("Ruuid", type="source")
Using R version 2.12.0, biocinstall version 2.7.4.
Installing Bioconductor version 2.7 packages:
[1] "Ruuid"
Please wait...

Installing package(s) into ‘/ebio/abt6/jmao/rpacks’
(as ‘lib’ is unspecified)
trying URL 'http://www.bioconductor.org/packages/2.7/bioc/src/contrib/Ruuid_1.28.0.tar.gz'
Content type 'application/x-gzip' length 71906 bytes (70 Kb)
opened URL
==================================================
downloaded 70 Kb

* installing *source* package ‘Ruuid’ ...
checking for pkg-config... /usr/bin/pkg-config
checking for glib-config... no
checking for glib-2.0... configure: error: No glib package information found
ERROR: configuration failed for package ‘Ruuid’
* removing ‘/ebio/abt6/jmao/rpacks/Ruuid’

The downloaded packages are in
	‘/tmp/RtmpGQAHn2/downloaded_packages’
Warning message:
In install.packages(pkgs = pkgs, repos = repos, ...) :
  installation of package 'Ruuid' had non-zero exit status



#######################(1) my version and
sessionInfo()#####################################
> version
               _
platform       x86_64-unknown-linux-gnu
arch           x86_64
os             linux-gnu
system         x86_64, linux-gnu
status
major          2
minor          12.0
year           2010
month          10
day            15
svn rev        53317
language       R
version.string R version 2.12.0 (2010-10-15)
> sessionInfo()
R version 2.12.0 (2010-10-15)
Platform: x86_64-unknown-linux-gnu (64-bit)

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8
 [5] LC_MONETARY=C              LC_MESSAGES=en_US.UTF-8
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C
 [9] LC_ADDRESS=C               LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

loaded via a namespace (and not attached):
[1] tools_2.12.0