[BioC] Importing .cdt files generated by Cluster3.0 into R

[Valerie Obenchain]

Hello,

For importing these files into R see ?read.table and ?read.delim.

Reading the gtr should be fairly straightforward with read.table. The 
cdt file might be better with read.delim and set fill=TRUE.

Valerie



On 10/18/2011 07:58 AM, Sohail [guest] wrote:
> Dear All,
>
> I have used the Cluster3.0 to generate cluster for gene expression data.  I would like to import these files (.cdt,.gtr) into R. to generate silohuette plots.
> Basically, I would like to check for the robustness of the clusters.  Could the files from Cluster3.0 be imported into R?  I would appreciate any other suggestions.
> Thanks.
>
>   -- output of sessionInfo():
>
> none
>
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