[BioC] overview function of made4

Martin Morgan mtmorgan at fhcrc.org
Tue Jul 3 22:39:35 CEST 2012


On 07/02/2012 08:30 AM, Anja Rockstroh wrote:
> Hello Aedin,
>
> I noticed that the default colours the overview function of the made4
> package is using is the 21 colour palette of getcol. However, I was
> wondering whether this can be changed to custom colours? I have tried
> to include arraycol or cols into the overview function, but I always
> get the "unused arguments" error message. I am sorry if this is a
> stupid question, I am still very new to R and it might just be a
> typing error on my side. Could you please give me an example command
> line?

Usually best to cc the packageDescription("made4")$Maintainer in posts, 
as they are in the best position to help. From looking at the code and 
man page I would guess that it hasn't been written to support choice of 
colors that deviate from the maintainer's favorites.

Martin


>
> Thanks very much in advance for your help, it is much appreciated.
>
> Best regards, Anja
>
> Anja Rockstroh | Research Fellow | Australian Prostate Cancer
> Research Centre - Queensland | Institute of Health and Biomedical
> Innovation | Queensland University of Technology / QUT | Office:
> Level 1 Building 33 | Lab: Level 2 R-wing |Princess Alexandra
> Hospital | 199 Ipswich Rd | Brisbane QLD 4102 Australia | Lab phone:
> 07 3176 5491 | Office phone: 07 3176 3074 | fax: 07 3176 7440 |
> email: anja.rockstroh at qut.edu.au
>
>
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