[BioC] GO question

[Gustavo Fernández Bayón]

Hi everybody. 

A simple question: is there any way I can perform a GO enrichment analysis without using the annotation packages? 

Problem is, I am trying to perform a series of GO analyses in parallel (with foreach), and I am experiencing problems with every call trying to access the same SqLite database. For now, I have solved it by putting "library(GOstats)" inside the inner foreach, but I was wondering if there is a better way.

Regards,
Gus

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