[BioC] Create transcriptDb using gff3 files? - library GenomicFeatures and rtracklayer

Bargsten, Joachim joachim.bargsten at wur.nl
Tue Sep 18 17:36:24 CEST 2012


Hi all,
I tried to figure out how to get GFF3 annotation data into a
TranscriptDb object. So far, I could only find the posts in this thread
and the proposed solution did not work very well for me. In the end, I
implemented a "makeTranscriptDbFromGFF3" function myself. For those who
are interested, you can find my version on:

https://gist.github.com/3743732


	Joachim


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