[BioC] Create transcriptDb using gff3 files? - library GenomicFeatures and rtracklayer

[Bargsten, Joachim]

I see, nice. Thanks for pointing me to the correct package/version.

	Joachim


On Di, 2012-09-18 at 09:16 -0700, Marc Carlson wrote:
> Hi Joachim,
> 
> The version of the GenomicFeatures package in the development branch of 
> Bioconductor has had this functionality since the spring.  The new 
> release scheduled for October 2nd will also have it.
> 
> 
>    Marc
> 
> 
> 
> On 09/18/2012 08:36 AM, Bargsten, Joachim wrote:
> > Hi all,
> > I tried to figure out how to get GFF3 annotation data into a
> > TranscriptDb object. So far, I could only find the posts in this thread
> > and the proposed solution did not work very well for me. In the end, I
> > implemented a "makeTranscriptDbFromGFF3" function myself. For those who
> > are interested, you can find my version on:
> >
> > https://gist.github.com/3743732
> >
> >
> > 	Joachim
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