[BioC] Gene Ontologies exploration

Jose M Garcia Manteiga manteiga.garcia at gmail.com
Wed Feb 6 19:16:40 CET 2013


Dear Biocs,
I would like to produce pie charts or similar with percentage of genes associated to selected Gene Ontologies categories (or KEGG), preferable if I can choose the categories so that I can customise them using some search by keyword option.
I would like to do it to compare the percentage of genes expressed in two different samples for the selected categories. 
I have explored Voronto (outside Bioc) and goProfiles and GeneAnswers, but I am not sure these are the best options.
Thanks in advance
Regards
Jose

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Jose M. Garcia Manteiga PhD

Data analyst in Functional Genomics
Center for Translational Genomics and Bioinformatics
San Raffaele Scientific Institute
Via Olgettina 58
20132 Milano
Italy

Office: +39 02 26434751



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