[BioC] org.Hs.eg.db package loading issues

[Ekta Jain]

   Hi,

   I got some error too when I was trying to load the org.Hs.eg.db in R. I
   downloaded the .zip file of the package and then installed it manually as a
   local package, it worked for me.

   Hope it works for you as well.

   Regards
   Ekta Jain
   Research Analyst
   Biotechnology and Bio-resources Division
   The Energy and Resources Institute, India Habitat Centre
   Lodhi Road, New Delhi - 110033
   #09958818853
   ekta.jain at teri.res.in

   -----bioconductor-bounces at r-project.org wrote: -----

   To: bioconductor at r-project.org, jial2 at mail.nih.gov
   From: "Guest [guest]"
   Sent by: bioconductor-bounces at r-project.org
   Date: 07/26/2013 09:13PM
   Subject: [BioC] org.Hs.eg.db package loading issues
   Hi,
   When I run the R code on analysis of HuGene2.0ST array, it generated an
   error as follows:
   > source("/Users/jial2/Documents/projects/Project422/limmaAnalysis.R")
   Loading required package: org.Hs.eg.db
   Error : .onLoad failed in loadNamespace() for 'org.Hs.eg.db', details:
     call: get(name, envir = asNamespace(pkg), inherits = FALSE)
     error: object '.setDummyField' not found
   Error: package â■˜org.Hs.eg.dbâ■™ could not be loaded
   Then I run the library individually, it still has the same error message.
   > library(org.Hs.eg.db)
   Error : .onLoad failed in loadNamespace() for 'org.Hs.eg.db', details:
     call: get(name, envir = asNamespace(pkg), inherits = FALSE)
     error: object '.setDummyField' not found
   Error: package or namespace load failed for â■˜org.Hs.eg.dbâ■™
   Any suggestions would be highly appreciated.
   Thanks,
    -- output of sessionInfo():
   > sessionInfo()
   R version 3.0.0 (2013-04-03)
   Platform: x86_64-apple-darwin10.8.0 (64-bit)
   locale:
   [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
   attached base packages:
   [1] parallel  stats     graphics  grDevices utils     datasets  methods
   base
   other attached packages:
    [1] AnnotationDbi_1.22.6       limma_3.16.6
   pd.hugene.2.0.st_3.8.0
    [4] RSQLite_0.11.4             DBI_0.2-7                  oligo_1.24.1

    [7]      oligoClasses_1.22.0                           affyPLM_1.36.0
   preprocessCore_1.22.0
   [10] arrayQualityMetrics_3.16.0 affyQCReport_1.38.0        lattice_0.20-15

   [13] simpleaffy_2.36.1          gcrma_2.32.0               genefilter_1.42.0

   [16]    affy_1.38.1                                     Biobase_2.20.1
   BiocGenerics_0.6.0
   [19] BiocInstaller_1.10.2
   loaded via a namespace (and not attached):
    [1]   affxparser_1.32.3      affyio_1.28.0            annotate_1.38.0
   beadarray_2.10.0
    [5]     BeadDataPackR_1.12.0    Biostrings_2.28.0          bit_1.1-10
   Cairo_1.5-2
    [9]  cluster_1.14.4           codetools_0.2-8        colorspace_1.2-2
   ff_2.2-11
   [13]    foreach_1.4.1                GenomicRanges_1.12.4   grid_3.0.0
   Hmisc_3.12-2
   [17]  hwriter_1.3               IRanges_1.18.2         iterators_1.0.6
   KernSmooth_2.23-10
   [21]  latticeExtra_0.6-24   plyr_1.8                RColorBrewer_1.0-5
   reshape2_1.2.2
   [25]   rpart_4.1-1               setRNG_2011.11-2        splines_3.0.0
   stats4_3.0.0
   [29]  stringr_0.6.2          survival_2.37-4      SVGAnnotation_0.93-1
   tools_3.0.0
   [33]  vsn_3.28.0                 XML_3.95-0.2             xtable_1.7-1
   zlibbioc_1.6.0
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