[BioC] ka

Kaj Chokeshaiusaha [guest] guest at bioconductor.org
Thu Oct 3 10:17:24 CEST 2013

Dear R helper,

I'm trying to create the annotation package for GPL10427. It is ovine species platform, and there is no .db0 nor schema for it.

I'm trying to read 'Creating an annotation package
with a new database schema'. It's ashamed of me, but I'm an R beginner. I must accept that I loss most of the important contents and I cannot gather enough ideas to apply it with what I have to do.

Would anyone please simplify me what I need to do in order to create the platform in this situation?

With Respects,

 -- output of sessionInfo(): 

R version 3.0.2 (2013-09-25)
Platform: x86_64-pc-linux-gnu (64-bit)

 [1] LC_CTYPE=en_GB.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=en_GB.UTF-8        LC_COLLATE=en_GB.UTF-8    
 [7] LC_PAPER=en_GB.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            

attached base packages:
[1] parallel  stats     graphics  grDevices utils     datasets  methods  
[8] base     

other attached packages:
[1] AnnotationForge_1.2.2 org.Hs.eg.db_2.9.0    RSQLite_0.11.4       
[4] DBI_0.2-7             AnnotationDbi_1.22.6  Biobase_2.20.1       
[7] BiocGenerics_0.6.0   

loaded via a namespace (and not attached):
[1] IRanges_1.18.4 stats4_3.0.2  

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