[BioC] Creating Annotation package for GPL10427
Kaj Chokeshaiusaha [guest]
guest at bioconductor.org
Thu Oct 3 12:21:22 CEST 2013
Dear R helper,
I'm trying to create the annotation package for GPL10427. It is ovine species platform, and there is no .db0
nor schema for it.
I'm trying to read 'Creating an annotation package
with a new database schema'. It's ashamed of me, but I'm an R beginner. I must accept that I loss most of the
important contents and I cannot gather enough ideas to apply it with what I have to do.
Would anyone please simplify me what I need to do in order to create the platform in this situation?
-- output of sessionInfo():
R version 3.0.2 (2013-09-25)
Platform: x86_64-pc-linux-gnu (64-bit)
 LC_CTYPE=en_GB.UTF-8 LC_NUMERIC=C
 LC_TIME=en_GB.UTF-8 LC_COLLATE=en_GB.UTF-8
 LC_MONETARY=en_GB.UTF-8 LC_MESSAGES=en_GB.UTF-8
 LC_PAPER=en_GB.UTF-8 LC_NAME=C
 LC_ADDRESS=C LC_TELEPHONE=C
 LC_MEASUREMENT=en_GB.UTF-8 LC_IDENTIFICATION=C
attached base packages:
 parallel stats graphics grDevices utils datasets methods
other attached packages:
 hgu95av2.db_2.9.0 AnnotationForge_1.2.2 org.Hs.eg.db_2.9.0
 RSQLite_0.11.4 DBI_0.2-7 AnnotationDbi_1.22.6
 Biobase_2.20.1 BiocGenerics_0.6.0
loaded via a namespace (and not attached):
 IRanges_1.18.4 stats4_3.0.2 tcltk_3.0.2 tools_3.0.2
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