[BioC] Version 1.10 of spade appears to be non-compatible with Cytoscape 2.8.x

John Quinn [guest] guest at bioconductor.org
Wed Mar 19 22:38:36 CET 2014

Running spade 1.10 produces outputs that contain a folder of CSV tables, whereas 1.8 produced a folder of pdf files.  The latter works with Cytoscape 2.8.x and the prior produces empty boxes.  

I prefer sticking with Cytoscape 2.8 as opposed to moving up to 3.x as the documentation seems much better so far, so is there a place where spade 1.8 is still available for download?

 -- output of sessionInfo(): 

R version 3.0.1 (2013-05-16)
Platform: x86_64-apple-darwin10.8.0 (64-bit)

[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods base 

Sent via the guest posting facility at bioconductor.org.

More information about the Bioconductor mailing list