[BioC] Microarray data analysis

Steve Lianoglou lianoglou.steve at gene.com
Sat Mar 22 23:50:43 CET 2014


On Sat, Mar 22, 2014 at 8:12 AM, Prabhakar [guest]
<guest at bioconductor.org> wrote:
> Hi Friends,
>    I want to use Bioconductor for microarray data analysis for that I need one example data on which I can try R codes? Can you please suggest start point for learning Bioconductor. Which package I should start with? Thanks.

For microarray analysis, you'll need a very good reason to not go with
limma. You're going to want to thoroughly ingest its user's guide:


For more general bioconductor overviews, click through the different
years's worth of materials from different workshops listed here:


For microarray specific analyses, I guess you will find a greater
fraction of them in earlier years, just browse through the different
stuff there ... there's a lot to learn.


Lastly, this:



Steve Lianoglou
Computational Biologist

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