[R] BLAST output parsing

[Duncan Murdoch]

On Fri, 19 Mar 2004 11:46:25 -0500 (EST), Matthew Oliver
<oliver at imcs.marine.rutgers.edu> wrote :

>Hi All,
>
>I have use the BLAST program provided by NCBI to compare large databases and have 
>generated a lot of output in one long text file. I was looking for a way to parse 
>out the results in a nice way so that it could be easily visualized. I was thinking 
>of trying to write something in R, but I wanted to check in with the help group to 
>make sure I am not re-inventing the wheel. Any help would be great!

I don't know if this is there or not, but the Bioconductor project
(bioconductor.org) is a likely place to look for something like that.

Duncan