[R] Mallows' distance or Earth Mover's distance in R?

Rainer M Krug r.m.krug at gmail.com
Mon Oct 27 11:29:16 CET 2008


On Sun, Oct 26, 2008 at 4:01 PM, Matthias Kohl <Matthias.Kohl at stamats.de> wrote:
> Hi Rainer,
>
> we have not implemented the Mallow's distance so far. Out package distrEx
> includes implementations of the Hellinger, the Kolmogorov, the total
> variation and the Cramer von Mises distance. Combined with our package
> distrMod one can compute minimum distance estimators.

Thanks a lot for this info - I will look into these options.

Rainer

>
> library(distrMod)
> ?MCEstimator
> ?MDEstimator
>
> hth,
> Matthias
>
> Rainer M Krug wrote:
>>
>> Hi
>>
>> I am looking for an implementation (or alternative to) Mallow's
>> distance or the Earth Mover's distance to compare distributions or
>> unnormalized distributions (signatures).
>>
>> Is there an implementation in R or can somebody recommend an alternative?
>>
>> Thanks
>>
>> Rainer
>>
>>
>>
>
> --
> Dr. Matthias Kohl
> www.stamats.de
>
>



-- 
Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation
Biology, UCT), Dipl. Phys. (Germany)

Centre of Excellence for Invasion Biology
Faculty of Science
Natural Sciences Building
Private Bag X1
University of Stellenbosch
Matieland 7602
South Africa



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