[R] package Rgraphviz or similar

Martin Morgan mtmorgan at fhcrc.org
Fri Jun 12 18:56:04 CEST 2009


Robbie Morrison wrote:
> Hello R users
> 
> I am looking for a package to visualize "relatively
> planar" directed graphs, with say 100 nodes and
> specified using an adjacency list.
> 
> 'Rgraphviz', currently listed on the R-FAQ, seemed
> suitable (FAQ version 2.9.2009-06-05)
> 
> But when I looked for the package, I found it had been
> recently "removed" and was instead directed to archive
> copies (http://cran.r-project.org/web/packages/Rgraphviz)

Rgraphviz is available in Bioconductor

  http://www.bioconductor.org/packages/release/bioc/html/Rgraphviz.html

Martin

> 
> Can anybody suggest an alternative R package ('igraph'
> perhaps)?  Or would I be better it generate my own .gv
> GraphViz files and then pass these directly to
> GraphViz.  Or will 'Rgraphviz' return soon?
> 
> Any suggestions much appreciated, Robbie
> ---
> Robbie Morrison
> PhD student -- policy-oriented energy system simulation
> Technical University of Berlin (TU-Berlin), Germany
> University email (redirected) : morrison at iet.tu-berlin.de
> Webmail (preferred)           : robbie at actrix.co.nz
> [from IMAP client]
> 
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