[R] Reproducible research

Matt Shotwell shotwelm at musc.edu
Thu Sep 9 17:41:05 CEST 2010


Well, the attachment was a dud. Try this:

http://biostatmatt.com/R/markup_0.0.tar.gz

-Matt

On Thu, 2010-09-09 at 10:54 -0400, Matt Shotwell wrote:
> I have a little package I've been using to write template blog posts (in
> HTML) with embedded R code. It's quite small but very flexible and
> extensible, and aims to do something similar to Sweave and brew. In
> fact, the package is heavily influenced by the brew package, though
> implemented quite differently. It depends on the evaluate package,
> available in the CRAN. The tentatively titled 'markup' package is
> attached. After it's installed, see ?markup and the few examples in the
> inst/ directory, or just example(markup).
> 
> -Matt
> 
> On Thu, 2010-09-09 at 01:47 -0400, David Scott wrote:
> > I am investigating some approaches to reproducible research. I need in 
> > the end to produce .html or .doc or .docx. I have used hwriter in the 
> > past but have had some problems with verbatim output from  R. Tables are 
> > also not particularly convenient.
> > 
> > I am interested in R2HTML and R2wd in particular, and possibly odfWeave.
> > 
> > Does anyone have sample documents using any of these approaches which 
> > they could let me have?
> > 
> > David Scott
> > 
> > _________________________________________________________________
> > 
> > David Scott	Department of Statistics
> > 		The University of Auckland, PB 92019
> > 		Auckland 1142,    NEW ZEALAND
> > Phone: +64 9 923 5055, or +64 9 373 7599 ext 85055
> > Email:	d.scott at auckland.ac.nz,  Fax: +64 9 373 7018
> > 
> > Director of Consulting, Department of Statistics
> > 
> > ______________________________________________
> > R-help at r-project.org mailing list
> > https://stat.ethz.ch/mailman/listinfo/r-help
> > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> > and provide commented, minimal, self-contained, reproducible code.
> 

-- 
Matthew S. Shotwell
Graduate Student 
Division of Biostatistics and Epidemiology
Medical University of South Carolina



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