[R] Batch open netcdf files and get variables

[Marc Girondot]

I make an example for the use of this package here:
http://max2.ese.u-psud.fr/epc/conservation/Girondot/Publications/Blog_r/Entrees/2013/2/26_Using_package_RNetCDF_with_SST.html

Sincerely
Marc Girondot

Le 12/04/13 17:39, Enhao Du a écrit :
> Hi, I'm new to R. I have some daily soil moisture data for the year 1979 in netcdf format such as these
> sm19790101.1.nc
> sm19790102.1.nc
> .
> .
> .
> sm19791231.1.nc
>
> I need to average a variable called "sm" to monthly resolution. I've done these
>
> days = formatC(1:31, width=2, flag="0")
> ncfiles = lapply(days, function(d){
>      filename = paste("sm197901", d, ".1.nc", sep="")
>      #print(filename)
>      open.nc(filename)
> })
>
> to open the files in January. Questions is: how may I get the variable from each opened file. Rnetcdf package has the var.get.nc() that only read object of class "Netcdf" returned from open.nc(). Any help would be appreciated.
>
> Enhao
> 	[[alternative HTML version deleted]]
>
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-- 
__________________________________________________________
Marc Girondot, Pr

Laboratoire Ecologie, Systématique et Evolution
Equipe de Conservation des Populations et des Communautés
CNRS, AgroParisTech et Université Paris-Sud 11 , UMR 8079
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91405 Orsay Cedex, France

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