[R] Installing Cardinal Workflows

Shadrack Mutuku shadymutu at gmail.com
Wed Apr 19 05:18:01 CEST 2017

I have successfully installed the cardinal package but having issues 
installing cardinal workflows.  I am getting the following error message on 
my console:

> source("http://bioconductor.org/biocLite.R")
Bioconductor version 3.4 (BiocInstaller 1.24.0), ?biocLite for help
> biocLite("CardinalWorkflows")
BioC_mirror: https://bioconductor.org
Using Bioconductor 3.4 (BiocInstaller 1.24.0), R 3.3.3 (2017-03-06).
Installing package(s) ‘CardinalWorkflows’
installing the source package ‘CardinalWorkflows’

trying URL 
Content type 'application/x-gzip' length 150031609 bytes (143.1 MB)
downloaded 143.1 MB

'C:\Program' is not recognized as an internal or external command,
operable program or batch file.

The downloaded source packages are in
installation path not writeable, unable to update packages: cluster, 
Warning messages:
1: running command '"C:/Program Files/R/R-3.3.3/bin/x64/R" CMD INSTALL -l 
had status 1 
2: In install.packages(pkgs = doing, lib = lib, ...) :
  installation of package ‘CardinalWorkflows’ had non-zero exit status
> library(CardinalWorkflows)
Error in library(CardinalWorkflows) : 
  there is no package called ‘CardinalWorkflows’

*Please help. Thanks*

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