[R] Output for pasting multiple vectors

[Spencer Brackett]

Hello,

The following is the bit of code I was having trouble with reproducing;
(meth) being the set matrix of the dataset I am working within R...

colnames(meth) = sapply(colnames(meth), function(i){
  c1 = strsplit(i,split ='.', fixed = T)[[1]]
  c1[4] = paste(strsplit(c1[4],split = "",fixed = T)[[1]][1:2],collapse =
 "")
  paste(c1,collapse = ".")

And this is the reprex () that R generated...

Error in parse(text = x, keep.source = TRUE) :
  <text>:28:0: unexpected end of input
26:
27:
   ^

Does this perhaps make my question clearer? Or should I provide a more
extensive reprex of my work for background?

P.S. Above text should be formatted correctly this time (according to the
posting guide rules), if not, I will try resetting my client email again.

Best,

Spencer


On Tue, Jun 25, 2019 at 9:29 AM Spencer Brackett <
spbrackett20 using saintjosephhs.com> wrote:

> Mr. Barradas,
>
>   My apologies for the delayed response. No, (meth) is not a dataset
> within CRAN. I’m not sure why my supervisor wrote that in as the object for
> the bit of script I shared previously. Assuming that the correct object for
> this particular command is to be a data, the one with which we are working
> is a TCGA dataset containing Glioblastoma data. We are attempting to
> analyze available methylation information.
>
> Best,
>
> Spencer
>
>
> On Sat, Jun 22, 2019 at 3:08 AM Rui Barradas <ruipbarradas using sapo.pt> wrote:
>
>> Hello,
>>
>> I cannot find the dataset. meth is a (CRAN) package dataset?
>>
>> Rui barradas
>>
>> Às 02:11 de 22/06/19, Spencer Brackett escreveu:
>> > Hello,
>> >
>> > I am attempting to paste multiple vectors using the paste() function
>> for a
>> > dataset that  I'm working with. Shouldn't I be receiving some kind of
>> > output as a result of the following?
>> >
>> >   meth=as.matrix(meth)
>> >> colnames(meth) = sapply(colnames(meth), function(i){
>> > + c1 = strsplit(i,split ='.', fixed = T)[[1]]
>> > + c1[4] = paste(strsplit(c1[4],split = "",fixed = T)[[1]][1:2],collapse
>> =
>> >   "")
>> > + paste(c1,collapse = ".")
>> > + {
>> >
>> > Best,
>> >
>> > Spencer Brackett
>> >
>> >       [[alternative HTML version deleted]]
>> >
>> > ______________________________________________
>> > R-help using r-project.org mailing list -- To UNSUBSCRIBE and more, see
>> > https://stat.ethz.ch/mailman/listinfo/r-help
>> > PLEASE do read the posting guide
>> http://www.R-project.org/posting-guide.html
>> > and provide commented, minimal, self-contained, reproducible code.
>> >
>>
>

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