[BioC] hist and mva.pairs problems

Laurent Gautier laurent@cbs.dtu.dk
Fri, 6 Dec 2002 05:44:40 +0100


I just looked at the picture you included. Well... right... I have to admit
the plot generated is not too nice. The man page for AffyBatch is a bit
incomplete about that. The function called by the method histx=AffyBatch) is
plotDensity.AffyBatch (try ?plotDensity.AffyBatch).

Try to feed 'hist' options like below:

data(affybatch.example)
hist(affybatch.example, col=rainbow(length(affybatch.example)), type="l", lty=1)


Hopin' it helps,



L.