[BioC] installation problems

Laurent Gautier laurent@cbs.dtu.dk
Tue, 11 Jun 2002 15:07:33 +0200


On Mon, Jun 10, 2002 at 05:17:24PM -0700, Beth Wilmot wrote:
> Hi,
> 
> I'm trying to install the whole package and I'm getting an error:
> 
> Creating a new generic function for "[[<-" on element 
> 2 of the search path 
> Making a generic for special function "[[<-" 
> Creating a new generic function for "[[" on element 2 
> of the search path 
> Making a generic for special function "[[" 
> Expanding the signature to include omitted arguments 
> in definition: j = "missing" 
> Creating a new generic function for "length" on element 
> 2 of the search path 
> Making a generic for special function "length" 
> Creating a new generic function for "[" on element 2 
> of the search path 
> Making a generic for special function "[" 
> Error in conformMethod(signature, mnames, fnames) : 
>         Method has formal arguments not in generic function: file, append, quote, sep, eol, na, dec, row.names, col.names, qmethod
> Error in library(pkg, character.only = TRUE) : 
>         .First.lib failed
> 
> The Biobase shows up on the library list but will only get this far when I try to open it.
> 
> Thanks, Beth
> 
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Dear Beth,

Some of the bioconductor packages are known to require R-1.5.x.
Could tell us what is the version of R you are using (and eventually your
operating system) ?

Best,



Laurent