[BioC] ReadAffy(widget=TRUE) error in R 1.7.0 and affy 1.2.15
Dick Beyer
dbeyer at u.washington.edu
Mon May 5 10:50:59 MEST 2003
I am getting the following error:
> peter48.raw <- ReadAffy(widget=TRUE)
Error in structure(.External("dotTcl", ..., PACKAGE = "tcltk"), class = "tclObj") :
[tcl] ambiguous option "-col": must be -column, -columnspan, -in, -ipadx, -ipady, -padx, -pady, -row, -rowspan, or -sticky.
The first thing that happens when I execute the ReadAffy command is the "File Browser" comes up and I select the CEL files. When I select the "Finish" button, I get the error message and a thin "Sapmle Information" window pops up (the word Sample is misspelled).
I just downloaded R 1.7.0 and getBioC(libName="all",release="devel") which all loaded just fine. I have windows 2000.
My startup commands to R are:
"C:\Program Files\R\rw1070\bin\Rgui.exe" --max-mem-size=4000M
library(affy)
Sys.putenv("TCL_LIBRARY"="c:/Program Files/Tcl/lib/tcl8.3")
Any help or suggestions would be most appreciated.
Thanks much,
Dick
*******************************************************************************
Richard P. Beyer, Ph.D. University of Washington
Tel.:(206) 616 7378 Env. & Occ. Health Sci. , Box 354695
Fax: (206) 685 4696 4225 Roosevelt Way NE, # 100
Seattle, WA 98105-6099
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