[BioC] Analysis system requirement

Ben Bolstad bolstad at stat.berkeley.edu
Mon Sep 15 09:30:43 MEST 2003

If you are interested in the requirements for RMA type expression
measures then I did a few simulations that might be of interest.


This should give you a ballpark idea of what you need and where the limits
are. At least in regards to probe level analysis.


On Mon, 15 Sep 2003, Sek Won Kong, M.D wrote:

> Hi,
> I just wonder what kind of system ( cpu type, speed and amount of physical memory )  do you use for data analysis. Because I think most of Wintel users are suffered from memory handling problem and computing time. Ben Bolstad kindly offered computing time by cpu speed, memory, array type and number of arrays in his AffyExtensions vignettes. This kind of information would be helpful for people who just about to setup analysis system for microarray.
> Thanks!
> -SW
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