[BioC] Beginner help

[Jeff Gentry]

>    I have been reading and trying to work through some of the demos and 
> tutorials available for R and Bioconductor.  I seem to be spending more 
> time working around commands that are no longer recognized in newer version 
> of R.   Are there ways around this?  Newer tutorial materials?  The Lab 
> materials would be particular helpful (e.g. End2EndLab)  but many of the 
> associated files and commands do not work with newer versions of R.  Are 
> there updated files somewhere?

Can you give specific examples of what is not working?  It is hard to give
you advice w/o knowing exactly what you're talking about.