[BioC] hgu133aMAP2PROBE...?

Ting-Yuan Liu tliu at fhcrc.org
Mon Dec 12 20:20:32 CET 2005


Hi Dario,

We use the function "saveMat" in AnnBuilder to transform a matrix to an 
environment.  Have a look at that and you can write your own function to 
create hgu133aPATH2PROBE environment. 

HTH,
Ting-Yuan
______________________________________
Ting-Yuan Liu
Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
Seattle, WA, USA
______________________________________

On Mon, 12 Dec 2005, Dario Greco wrote:

> hello,
> I am using the package "globaltest".
> I would like to test for the cytoband position of the probes (or chromosomes).
> 
> i am trying to figure out how to build up a "hgu133aMAP2PROBE" environment 
> which would have similar structure to hgu133aPATH2PROBE, but so far i was not 
> able to ifnd a way.
> So far i have looked into the vignette for package AnnBuilder, but i was not 
> able to find what i am looking for.
> 
> any suggestion? is there any easier way which allows me to carry out this 
> analysis without creating a "hgu133aMAP2PROBE"?
> 
> thanks a lot,
> Dario Greco
> 
> -- 
> 
> Dario Greco
> 
> Institute of Biotechnology - University of Helsinki
> Building Cultivator II
> P.O.Box 56    Viikinkaari 4
> FIN-00014     Finland
> 
> Office: +358 9 191 58951
> Fax: +358 9 191 58952
> Mobile: +358 44 023 5780
> 
> Lab WebPage: 
> http://www.biocenter.helsinki.fi/bi/dna-microarray/
> 
> Personal WebPage: 
> http://www.biocenter.helsinki.fi/bi/dna-microarray/dario.htm
> 
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
>



More information about the Bioconductor mailing list