[BioC] error in installing Bioconductor development packages

[Seth Falcon]

Hi Tom,

Thanks for reporting this.  We've been "upgrading" our build process
and, unfortunately, it seems we haven't worked out all the kinks.

I believe that I have fixed it.  Can you please try again and let us
know if you encounter further difficulties?

Thanks, and sorry for the inconvenience.

+ seth


On Thu, Feb 17, 2005 at 04:58:06PM -0800, Tom Shi wrote:
> Hi, I have a question.  When I tried to install the development packages
> (by getBioC(develOK=TRUE) )  an error is generated that says : 
> __________________________________________
> [1] "Installing reposTools ..."
> Loading required package: reposTools
> Loading required package: tools
> Error in getBioC(develOK = TRUE) : 
> default:        targets affy, cdna and exprs.
> exprs:          packages Biobase, annotate, genefilter, geneploter,
> edd, 
> ......
> (omitted)
> ...........
> all:            All of the Bioconductor p
> In addition: Warning message:
> error 1 in extracting from zip file 
> ___________________________________
>  
>  
> When I tried to run getBioC(develOK=TRUE) again, I get this error:
> ________________
> Error in checkReposTools(PACKAGES) : reposTools is out of date but
> currently loaded in your R session.  If you would like to continue,
> please either detach this package or restart your R seesion before
> running getBioC.
> __________
>  
>  
> Can you possibly tell me what went wrong? 
>  
> Thanks, 
>  
> Tom
> 
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