[BioC] Error in fitPLM
bolstad at stat.berkeley.edu
Sat Jun 18 05:00:16 CEST 2005
The root cause of this problem was that ygs98 arrays have some probesets
consisting of only a single probe and that was not being properly dealt
with in the case of the default model. I have fixed this problem in
affyPLM version 1.4.1.
On Fri, 2005-06-17 at 15:09 +0200, Pedro Botías wrote:
> this is the output when insert Data in R:
> AffyBatch object
> size of arrays=534x534 features (17828 kb)
> cdf=YG_S98 (9335 affyids)
> number of samples=8
> number of genes=9335
> The same error appear when I run affylmGUI with PLM normalization.
> On Fri, 2005-06-17 at 14:21 +0200, Pedro Botías wrote:
> > Hi
> > When I run Pset<-fitPLM(Data)
> > this is the error that appear:
> > Error in fitPLM(data) : LAPACK routine DPOTRF gave error code -4
> > How I can solucionated this error?
> > thanks
Ben Bolstad <bolstad at stat.berkeley.edu>
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