[BioC] Annotation pacakge for Exon arrays?

Peng Yu pengyu.ut at gmail.com
Fri Aug 21 00:11:02 CEST 2009


Hi,

I am looking the annotation file for Affymetrix GeneChip® Mouse Exon
1.0 ST Array.

I see the package mogene10stprobeset.db for GeneChip® Mouse Gene 1.0
ST Array. But I don't see the one for the Exon array.

Regards,
Peng

On Thu, Aug 20, 2009 at 4:55 PM, Benilton Carvalho<bcarvalh at jhsph.edu> wrote:
> you haven't described which exon array you want an annotation package for.
>
> but on this very same page you point us to you will find packages for:
>
> HuEx
> RaEx
> MoEx
>
> just search the page for these strings and you'll find the packages...
>
> but, again, remember that these will not give you summaries at the gene
> level just yet.
>
> b
>
> On Aug 20, 2009, at 6:46 PM, Peng Yu wrote:
>
>> Hi,
>>
>> I only find annotation package for Gene arrays. But I don't find any
>> package for Exon arrays. Can somebody let me know if there is some
>> annotation for Exon arrays some where else?
>>
>> http://bioconductor.org/packages/release/data/annotation/
>>
>> Regards,
>> Peng
>>
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>
>



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