[BioC] ReadAffy problems

[Laurent Gautier]

in short:
	move to affy-devel with R-1.7.0


L.

On Thu, May 01, 2003 at 10:37:23AM +0200, Dario Greco wrote:
> 
> hi at all.
> I need to perform the analysis of a dataset of nine .cel files, chipset
> hgu133a affymetrix.
> I've downloaded and installed R 1.7.0 and Bioconductor 1.1 and hgu133a1.2.1
> packages for windows (pc athlon1.4Gb, 512Mb ram under win2000pro OS).
> 
> After I've started R and gived my working dir., I load affy and hgu133a, but
> when I type:
> 
> mydata <- ReadAffy()
> 
> the answer is:
> 
> Warning messages:
> 1: the condition has length > 1 and only the first element will be used in:
> if (dim(intensity(cel)) != dim.intensity) stop(paste("CEL file dimension
> mismatch !\n(file",
> 2: the condition has length > 1 and only the first element will be used in:
> if (dim(intensity(cel)) != dim.intensity) stop(paste("CEL file dimension
> mismatch !\n(file",
> 3: the condition has length > 1 and only the first element will be used in:
> if (dim(intensity(cel)) != dim.intensity) stop(paste("CEL file dimension
> mismatch !\n(file",
> 4: the condition has length > 1 and only the first element will be used in:
> if (dim(intensity(cel)) != dim.intensity) stop(paste("CEL file dimension
> mismatch !\n(file",
> 5: the condition has length > 1 and only the first element will be used in:
> if (dim(intensity(cel)) != dim.intensity) stop(paste("CEL file dimension
> mismatch !\n(file",
> 6: the condition has length > 1 and only the first element will be used in:
> if (dim(intensity(cel)) != dim.intensity) stop(paste("CEL file dimension
> mismatch !\n(file",
> 7: the condition has length > 1 and only the first element will be used in:
> if (dim(intensity(cel)) != dim.intensity) stop(paste("CEL file dimension
> mismatch !\n(file",
> 8: the condition has length > 1 and only the first element will be used in:
> if (dim(intensity(cel)) != dim.intensity) stop(paste("CEL file dimension
> mismatch !\n(file",
> 9: the condition has length > 1 and only the first element will be used in:
> if (dim(intensity(cel)) != dim.intensity) stop(paste("CEL file dimension
> mismatch !\n(file",
> 
> what is the problem? Can you help me, please?
> Thankyou very much
> 
> Dario
> ________________________________________________
> Dario Greco
> IIGB - Institute of Genetics and Biophysics,
> "Adriano Buzzati-Traverso" - CNR
> Via P.Castellino, 111
> 80131     Napoli (Italy)
> tel +39 081 6132 367
> fax +39 081 6132 350
> e-mail: greco at iigb.na.cnr.it; greco at biogem.it
> 
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> https://www.stat.math.ethz.ch/mailman/listinfo/bioconductor

-- 
--------------------------------------------------------------
currently at the National Yang-Ming University in Taipei, Taiwan
--------------------------------------------------------------
Laurent Gautier			CBS, Building 208, DTU
PhD. Student			DK-2800 Lyngby,Denmark	
tel: +45 45 25 24 89		http://www.cbs.dtu.dk/laurent